Make population distribution using Mistry et al. data
mk_mistry_Nvec(province = "ON", age_cat = NULL)province for which to construct the matrix (if NULL, make a Canada-wide contact matrix)
(optional) list of age groups to aggregate ages in; use `mk_agecats()` to generate (must start with 0 and end with 84); default is single ages starting with 0 and up to 83, then a single 84+ category
a vector of population counts (one per age category)
Other classic_macpan:
add_d_log(),
add_updated_vaxrate(),
aggregate_agecats(),
calibrate_comb(),
calibrate(),
check_age_cat_compatibility(),
check_contact_rate_setting(),
col_multiply(),
condense_age(),
condense_params_vax(),
condense_state(),
condense_vax(),
dev_is_tikz(),
do_step(),
expand_params_age(),
expand_params_desc_age(),
expand_params_desc_variant(),
expand_params_desc_vax(),
expand_params_mistry(),
expand_params_variant(),
expand_params_vax(),
expand_state_age(),
expand_state_vax(),
expand_stateval_testing(),
fix_pars(),
fix_stored(),
forecast_ensemble(),
forecast_sim(),
getData(),
get_GI_moments(),
get_Gbar(),
get_R0(),
get_doses_per_day(),
get_evec(),
get_kernel_moments(),
get_opt_pars(),
get_r(),
invlink_trans(),
make_betavec(),
make_beta(),
make_jac(),
make_ratemat(),
make_state(),
make_test_wtsvec(),
make_vaxrate(),
mk_Nvec(),
mk_agecats(),
mk_contact_rate_setting(),
mk_pmat(),
mk_vaxcats(),
mle_fun(),
non_expanded_states,
rExp(),
read_params(),
repair_names_age(),
restore(),
run_sim_ageify(),
run_sim_break(),
run_sim_loglin(),
run_sim_mobility(),
run_sim_range(),
run_sim(),
show_ratemat(),
testify(),
texify(),
trans_state_vars(),
update_contact_rate_setting(),
update_foi(),
update_params_mistry(),
vis_model(),
write_params()
mk_mistry_Nvec()
#> [1] 135164 138093 139864 142418 141736 140690 140689 141366 140769 142846
#> [11] 145363 150086 151077 157190 160062 167394 169949 166838 168849 169875
#> [21] 169977 170554 165016 161003 162486 164884 163661 162809 164721 162908
#> [31] 165661 160889 159886 158462 162295 165417 169244 166448 169682 173026
#> [41] 183638 183001 184026 183330 186570 198452 210100 213540 215307 210920
#> [51] 212890 204568 197404 192988 187221 181643 180263 170596 163561 159249
#> [61] 157580 152923 149532 150536 150203 122426 115371 113108 107168 99563
#> [71] 94008 90903 86929 83049 77975 76662 71381 66101 64955 63276
#> [81] 61290 55772 52836 40586 216315