R/utils.R
invlink_trans.Rdapply inverse-link functions to parameter vector or list based on names
invlink_trans(p, unknown_link = "ignore", links = c("log", "log10", "logit"))a named vector or list of parameter values with names of the form linkfun_name
action to take when unknown link is specified (ignored)
allowed link prefixes
Other classic_macpan:
add_d_log(),
add_updated_vaxrate(),
aggregate_agecats(),
calibrate_comb(),
calibrate(),
check_age_cat_compatibility(),
check_contact_rate_setting(),
col_multiply(),
condense_age(),
condense_params_vax(),
condense_state(),
condense_vax(),
dev_is_tikz(),
do_step(),
expand_params_age(),
expand_params_desc_age(),
expand_params_desc_variant(),
expand_params_desc_vax(),
expand_params_mistry(),
expand_params_variant(),
expand_params_vax(),
expand_state_age(),
expand_state_vax(),
expand_stateval_testing(),
fix_pars(),
fix_stored(),
forecast_ensemble(),
forecast_sim(),
getData(),
get_GI_moments(),
get_Gbar(),
get_R0(),
get_doses_per_day(),
get_evec(),
get_kernel_moments(),
get_opt_pars(),
get_r(),
make_betavec(),
make_beta(),
make_jac(),
make_ratemat(),
make_state(),
make_test_wtsvec(),
make_vaxrate(),
mk_Nvec(),
mk_agecats(),
mk_contact_rate_setting(),
mk_mistry_Nvec(),
mk_pmat(),
mk_vaxcats(),
mle_fun(),
non_expanded_states,
rExp(),
read_params(),
repair_names_age(),
restore(),
run_sim_ageify(),
run_sim_break(),
run_sim_loglin(),
run_sim_mobility(),
run_sim_range(),
run_sim(),
show_ratemat(),
testify(),
texify(),
trans_state_vars(),
update_contact_rate_setting(),
update_foi(),
update_params_mistry(),
vis_model(),
write_params()
invlink_trans(c(log_p1=0,logit_p2=0))
#> p1 p2
#> 1.0 0.5
invlink_trans(list(log_p1=c(0,0),logit_p2=c(0,0,0)))
#> $p1
#> [1] 1 1
#>
#> $p2
#> [1] 0.5 0.5 0.5
#>
invlink_trans(list(p1=c(log_a=0,log_b=0),p2=4))
#> $p1
#> a b
#> 1 1
#>
#> $p2
#> [1] 4
#>
tst <- list(params = c(log_beta0 = 0.693147180559945), log_nb_disp = 4.60517018598809)
invlink_trans(tst)
#> $params
#> beta0
#> 2
#>
#> $nb_disp
#> [1] 100
#>
tst2 <- list(params=c(log_E0=1,log_beta0=1),log_nb_disp=c(H=0,report=0,death=0))
invlink_trans(tst2)
#> $params
#> E0 beta0
#> 2.718282 2.718282
#>
#> $nb_disp
#> H report death
#> 1 1 1
#>
invlink_trans(list(time_beta=1,log_time_beta=0)) ## ignore non-link prefixes
#> $time_beta
#> [1] 1
#>
#> $time_beta
#> [1] 1
#>
invlink_trans(list(time_beta=c(2,3),log_time_beta=c(a=0,b=0))) ##
#> $time_beta
#> [1] 2 3
#>
#> $time_beta
#> a b
#> 1 1
#>