condense vaxified parameters to base parameters

condense_params_vax(params)

Arguments

params

vaxified parameters (e.g. generated with `expand_params_vax()`)

Value

an object of class `params_pansim`

Examples

condense_params_vax(expand_params_vax(read_params("PHAC.csv")))
#>        beta0           Ca           Cp           Cm           Cs        alpha 
#> 1.000000e+00 6.666667e-01 1.000000e+00 1.000000e+00 1.000000e+00 3.900000e-01 
#>        sigma      gamma_a      gamma_m      gamma_s      gamma_p          rho 
#> 3.030303e-01 1.428571e-01 1.428571e-01 1.748252e-01 8.333333e-01 1.000000e-01 
#>        delta           mu            N           E0 nonhosp_mort        iso_m 
#> 0.000000e+00 9.560000e-01 1.000000e+06 5.000000e+00 0.000000e+00 0.000000e+00 
#>        iso_s         phi1         phi2         psi1         psi2         psi3 
#> 0.000000e+00 7.600000e-01 2.600000e-01 5.000000e-02 1.250000e-01 2.000000e-01 
#>       c_prop c_delay_mean   c_delay_cv    proc_disp         zeta 
#> 1.000000e-01 1.100000e+01 2.500000e-01 0.000000e+00 0.000000e+00